Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3359g00001 TGTGTTGAGATTTGCCACCGTGGCGCGTGTCCGCCTTGTCGGGCACGTGGTGTTTATAGGTGTCAATGTGGGAAGGTGAAAGAGGAGAGGGAGTGTTGTGATCGTGTTTTTCGATGTGATGATCCTTGTGAGAAGAAACTTAGTTGTGGGAAGCATGTTTGTGAGAGAGGGTGTCATTCTGGTGAATGTGGTGAGTGTCCTTTACAAGGGAAGAGAACATGTCCTTGTGGGAAAAGGGTATATGAAGGAATGCCTTGTGATGCTCCTATGCAGGTTTGTGGAGCTACTTGTGATAAAATGTTACCGTGTGGGTATCATAGATGCCATGAACGATGCCACCGTGGACAATGTATTGAGACTTGTAGGATTGTTGTGAGGAAATGTTGTCGCTGTGGTAGCCTCAAGAAAGATAGTAGGTACCTTGCTATCAAGATTTGGTATGTGAGAGGAAGTGTCAGACGTTGCGAGACTGTGGTAGGCATCCTTGTAAACGCCGCTGCTGTGATGGAGATTGCCCTCCGTGCTCAGAGATATGTGGCAAGAGGCTTCGCTGTAGGAACCATAAATGCCAATCTCCATGCCATAGAGGTCCCTGTGCTCCTTGTCCTATTATGGTGA 618 0.4757 CVEICHRGACPPCRARGVYRCQCGKVKEERECCDRVFRCDDPCEKKLSCGKHVCERGCHSGECGECPLQGKRTCPCGKRVYEGMPCDAPMQVCGATCDKMLPCGYHRCHERCHRGQCIETCRIVVRKCCRCGSLKKDSRYLAIKIWYVRGSVRRCETVVGILVNAAAVMEIALRAQRYVARGFAVGTINANLHAIEVPVLLVLLW 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3359g00001 205 CDD NF-X1-zinc-finger 93 136 - -
Trme3359g00001 205 SMART znfxneu3 103 123 IPR000967 GO:0005634|GO:0008270
Trme3359g00001 205 SMART znfxneu3 49 68 IPR000967 GO:0005634|GO:0008270
Trme3359g00001 205 SMART znfxneu3 1 15 IPR000967 GO:0005634|GO:0008270
Trme3359g00001 205 CDD NF-X1-zinc-finger 39 86 - -
Trme3359g00001 205 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 1 137 IPR034078 GO:0003700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Trme3359g00001 zf-NF-X1 0.0032 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3359g00001 K15683 - gmx:100799540 290.041