Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33596g00001 ATGCAATTGGAGCTAGAGATTGGAAGAGCAAGAAAACAGGGTATGTGCACTGGAAATGCATTAGATACCACTTTTATGGGATCACCTGAAACAATAAATCCAGGGATTGTTGCATTTGAAATTGAATATGGAAATTGGGTTGACGAGAACCATAGGCGGAACGAAGAGCTCAAAAACGTATTTCAAACTAACGCGTCTGAAGTGCAGCTCCGTCAAGTTGTTCAGAGTGTATTGAGCCATTACTCGGATCTTTTCAGAATGAAAGCAGACGCTGCAAAGGCCGATGTTCTCTATTTAATCTCTGGTGTGTGGAAACCGTCCGTAGAGCGCCTTTTCCTATGGATCGGAGGAGCCCGCCCCTCACAGCTTCTAAATCTCATTGTGCCGCAACTTGACCCTTTGACCGAACAACAACTTGCCAGCATTAAAAAACTTCACCTATCGTCTCAGCAAGCCGAAGACGCTCTTTCACAAGGACTAGATAAACTTCAGCAGAGTCTGGTTCAAGACATGGCAGTTGATCCTCTCAGTGCAACAAATCATGGATTTCAGATGGCTATTGCTATAGGAAAATTCGAGGCACTAGAAGGTTTTGTAAGTCAG 603 0.4411 MQLELEIGRARKQGMCTGNALDTTFMGSPETINPGIVAFEIEYGNWVDENHRRNEELKNVFQTNASEVQLRQVVQSVLSHYSDLFRMKADAAKADVLYLISGVWKPSVERLFLWIGGARPSQLLNLIVPQLDPLTEQQLASIKKLHLSSQQAEDALSQGLDKLQQSLVQDMAVDPLSATNHGFQMAIAIGKFEALEGFVSQ 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33596g00001 201 PANTHER TRANSCRIPTION FACTOR TGA9 1 201 - -
Trme33596g00001 201 ProSiteProfiles DOG1 domain profile. 36 201 IPR025422 GO:0006351|GO:0043565
Trme33596g00001 201 Pfam Seed dormancy control 55 128 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme33596g00001 Trme-Chr33596 176 1100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme33596g00001 2 201 Calmodulin-binding Proteins AT1G22070 51.980 1.78e-74 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme33596g00001 K14431 - gmx:100794268 293.893