Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33544g00001 ATGCAAGCCCCAGGCTGCTTTCTCTTGTTCTCATTTGTCTTCTTTTCATCAACATCAATTTTATCCCATGCACTTTCACATGAAGAAGCTTCTTTTATTGCCCGTCGTCAATTGTTACACCTTCAAGAAAACGAGGATTTACCTGAAAATTTCGCAGATAACTATACAACAAATTTAACTTTTCCTAATCCTGGAATCAAAAGTGCTTACATAGCACTTCAAGCATGGAAAAATGCAATTTATTCAGACCCATCAAATGTCACGACGAATTGGGTGGGTCCTGATGTATGTTCTTACCAAGGAGTTTTTTGTGCACCTTCTCTTAATGATTCAAAAGTTGAAGTTGTAGCTGGAATTGATCTTAATAATGCAGACATTGCAGGTTATATTCCTTCGGAGTTTGGTTTGTTGACTGATCTTGCTCTTTTTCATATAAACACAAACAGATTTTGCGGTATTATCCCAAAAAGTTTCTCCAAGTTAAAGCTTTTGTACGAGTTGGACATTAGTAACAACCGCTTTGTTGGAAGATTTCCTACACCTGTTCTTTCAATTCCTGATATCAAATACATGGATATCAGGTACAATGATTTTGAAGGAGAAATTCCTTCCGAGCTTTTCAATAAACCACTCGACGCTATATTTATGAACAACAATAGATTCACATCAACAATTCCAGATAATTTGGGAAATTCTCCTGCATCAGTTGTTGTTTTGGCCAATAACCATCTTAGTGGGTGTATTCCTGCAAGCATTGGTGAAATGAAAAATACATTGAACGAAATTGTTTTAATCAACAACAATCTCACCGGTTGTTTGCCTTCAGAAATTGGAAAGCTTGAACAAGTCACTGTTTTTGAC 861 0.3624 MQAPGCFLLFSFVFFSSTSILSHALSHEEASFIARRQLLHLQENEDLPENFADNYTTNLTFPNPGIKSAYIALQAWKNAIYSDPSNVTTNWVGPDVCSYQGVFCAPSLNDSKVEVVAGIDLNNADIAGYIPSEFGLLTDLALFHINTNRFCGIIPKSFSKLKLLYELDISNNRFVGRFPTPVLSIPDIKYMDIRYNDFEGEIPSELFNKPLDAIFMNNNRFTSTIPDNLGNSPASVVVLANNHLSGCIPASIGEMKNTLNEIVLINNNLTGCLPSEIGKLEQVTVFD 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33544g00001 287 Pfam Leucine rich repeat N-terminal domain 71 104 IPR013210 -
Trme33544g00001 287 SUPERFAMILY L domain-like 68 286 - -
Trme33544g00001 287 Gene3D Ribonuclease Inhibitor 68 233 IPR032675 -
Trme33544g00001 287 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 8 287 - -
Trme33544g00001 287 FunFam Leucine-rich repeat extensin-like protein 1 70 231 - -
Trme33544g00001 287 Gene3D Ribonuclease Inhibitor 234 287 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme33544g00001 Trme-Chr33544 240 1100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme33544g00001 1 287 Trihelix Transcription Factor Family AT3G19020 65.411 1.96e-127 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme33544g00001 - - gmx:121175033 438.343