Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33474g00001 ATGGATGGACATAATGTGTGTGTTTTCGCTTACGGTCAAACAGGCACAGGCAAAACATTCACCATGGATGGTACAAATGAGCAGCTAGGGATTATTCCTCGTGCTCTCGAAGAGCTCTTTCGTCAAGTCTCGATGGATGGTTCGTCTTCTTTTACTTTTTCAATGAGTATGTTGGAAGTTTACATGGGCAATGTTAGGGATCTGCTGGCTCCAAGACAGTCTTCTAGACCACATGAAAATATGACAAAATGTAATCTCAACATCCAAACAGATCCAAAGGGATTGGTGGAAATTGAGGGTCTCTCAGAAGTRCAAATTTCTGATTGTGCTAAAGCCAAATGGTGGTACAACAAGGGAAGAAGATTCAGATCAACCTCATGGACTAATGTGAATGAGGCATCAAGCAGGTCACACTGCTTGACAAGGATAAGCATATTTAGACGCGGGGATACTTCGGAAGCCAAAAGCGAAACAAGTAAGTTGTGGATGGTTGATCTTGGAGGCAGTGAACGGTTGCTGAAAAC 524 0.4294 MDGHNVCVFAYGQTGTGKTFTMDGTNEQLGIIPRALEELFRQVSMDGSSSFTFSMSMLEVYMGNVRDLLAPRQSSRPHENMTKCNLNIQTDPKGLVEIEGLSEVQISDCAKAKWWYNKGRRFRSTSWTNVNEASSRSHCLTRISIFRRGDTSEAKSETSKLWMVDLGGSERLLKT 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33474g00001 175 ProSiteProfiles Kinesin motor domain profile. 1 175 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme33474g00001 175 Gene3D Kinesin motor domain 1 175 IPR036961 -
Trme33474g00001 175 Pfam Kinesin motor domain 1 175 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme33474g00001 175 SMART kinesin_4 1 175 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme33474g00001 175 PRINTS Kinesin heavy chain signature 128 145 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme33474g00001 175 PRINTS Kinesin heavy chain signature 3 24 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme33474g00001 175 PRINTS Kinesin heavy chain signature 160 175 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme33474g00001 175 PANTHER KINESIN-RELATED 1 175 IPR027640 GO:0003777|GO:0007018
Trme33474g00001 175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 174 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme33474g00001 Trme-Chr33474 1 1081 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme33474g00001 1 175 Calmodulin-binding Proteins AT5G65930 39.548 1.74e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme33474g00001 - - psat:127107597 327.791