Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme334463g00001 GTAACCGCTGTTGGTACTAATACTGAATGGGGGCTTCTAATGGCTAGCATTTCAGAAGACACTGGTGAAGAAACACCTTTGCAGGTACGCTTGAATGGCCTTGCTACCTTCATCGGTGTTGCTGGACTCACTGTGGCTGTCGTTGTTCTAGTTGTGCTACTGGCCAGGTTGCCATCTACTT 181 0.4862 VTAVGTNTEWGLLMASISEDTGEETPLQVRLNGLATFIGVAGLTVAVVVLVVLLARLPST 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme334463g00001 60 Gene3D - 1 60 - -
Trme334463g00001 60 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 55 IPR023298 -
Trme334463g00001 60 PANTHER CATION TRANSPORTING ATPASE 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme334463g00001 Trme-Chr334463 80 330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme334463g00001 1 57 Primary Pumps ATPases AT5G57110 78.947 6.16e-24 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme334463g00001 K01537 - pvy:116109101 84.7297