Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme334055g00001 ATGCACAGGATGGGAGAACCTGCATATACTGTGGCATCTGACAGTGAAACTACTGGGGAGGAAAAGACCTTACCTCTTCCTGAAATAGCAATTGGAATCGACATTGGCACCTCACAGTGCAGTGTTGCTGTGTGGAATGGTTCCCAAGTCGAGCTTTTGAAAAACAAAAGAAATCAGAAGCTTATGAAATCATTTGTCACTTTCAAAGATGAATCCCCTTCTGGTGGAGTTACTAGCCAATTCTCCCACGAGCATGAAATGCTGTCCGGAGATACAATTTTCAACATGAAACGCCTGATTGGAAGAGTTGATAC 314 0.4331 MHRMGEPAYTVASDSETTGEEKTLPLPEIAIGIDIGTSQCSVAVWNGSQVELLKNKRNQKLMKSFVTFKDESPSGGVTSQFSHEHEMLSGDTIFNMKRLIGRVDT 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme334055g00001 105 MobiDBLite consensus disorder prediction 1 21 - -
Trme334055g00001 105 Gene3D - 18 104 - -
Trme334055g00001 105 Pfam Hsp70 protein 30 102 IPR013126 GO:0005524|GO:0140662
Trme334055g00001 105 SUPERFAMILY Actin-like ATPase domain 29 102 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme334055g00001 Trme-Chr334055 17 330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme334055g00001 30 102 Calmodulin-binding Proteins AT3G12580 36.986 1.09e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme334055g00001 K09489 - gmx:100809773 173.711