Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3339g00001 ATGATCTCCCCTTTCAAATGCTCAAGTAGTACTCAAAGAGTCAAAGGTACTAAAAAACCAAGGGCGGCCTTGAGCATGTGTAAGAACAACAGTTACAAACCTTGCTATAAGAAGTTATATCATGTTACTGATCATGCTAAGGCAAAGCTCCAGGCTGCGTGCCTCAATGTTTTCTCTTGTGATGATATCCTTGTTCTTGCTGCTCGTGATTTTGTTGTCACGGGAGGAACAACAAGTGTGGGATATTATTGGACTACATGTCCTAAAGCTGAATCAATTGTTAACGAGAAAACCACAATTCCAAACCTTGGTTTAAGAGGTTATGAAGTCATTGACGATGCTAAGGAAAAGCTCGAGGCTGTGTGTCCCGACGTTGTTTCTTGTGTTGATATTCTCGCCCTTGCTGCTCGTGATTCGGTTGTACTG 426 0.4225 MISPFKCSSSTQRVKGTKKPRAALSMCKNNSYKPCYKKLYHVTDHAKAKLQAACLNVFSCDDILVLAARDFVVTGGTTSVGYYWTTCPKAESIVNEKTTIPNLGLRGYEVIDDAKEKLEAVCPDVVSCVDILALAARDSVVL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3339g00001 142 SUPERFAMILY Heme-dependent peroxidases 28 81 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme3339g00001 142 Gene3D - 92 142 - -
Trme3339g00001 142 Gene3D - 9 81 - -
Trme3339g00001 142 PANTHER PEROXIDASE 25-RELATED 95 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme3339g00001 142 SUPERFAMILY Heme-dependent peroxidases 79 141 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme3339g00001 142 ProSiteProfiles Plant heme peroxidase family profile. 63 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme3339g00001 142 Pfam Peroxidase 95 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3339g00001 Trme-Chr3339 192 1391 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3339g00001 81 142 Peroxidase AT2G41480 47.573 4.05e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3339g00001 K00430 - rcu:8258720 88.5817