Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme333760g00001 ATGTCAGGAACATCCATGTCTTGTCCTCATGTTTCCGGTGTTGTCGCTCTTTTGAAATCAGCACATCCACAATGGAATGTTGCGGCTATAAGATCGGCATTAATAACCACAGCTAGTCCTTTAGATAATACACAAAATCCTATAAGGGATAATGGTTATCCTTCTCAATATGCTTCACCTCTTGCTATTGGAGCCGGTGAAATTGATCCTAATAGAGCAATGAATCCAG 229 0.4061 MSGTSMSCPHVSGVVALLKSAHPQWNVAAIRSALITTASPLDNTQNPIRDNGYPSQYASPLAIGAGEIDPNRAMNP 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme333760g00001 76 ProSiteProfiles Serine proteases, subtilase domain profile. 1 74 - -
Trme333760g00001 76 SUPERFAMILY Subtilisin-like 1 75 IPR036852 GO:0004252|GO:0006508
Trme333760g00001 76 Pfam Subtilase family 1 46 IPR000209 GO:0006508|GO:0008236
Trme333760g00001 76 ProSitePatterns Serine proteases, subtilase family, serine active site. 3 13 IPR023828 -
Trme333760g00001 76 Gene3D Peptidase S8/S53 domain 1 76 IPR036852 GO:0004252|GO:0006508
Trme333760g00001 76 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 76 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme333760g00001 Trme-Chr333760 16 244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme333760g00001 1 76 Subtilisin-like Serine Gene Family AT2G05920 53.947 1.18e-22 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme333760g00001 - - ccaj:109814699 140.198