Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33369g00001 AATGCAAAACAAGATTCTTTGAAGAGGTTTAAAGGTGATGAGAAAATGCCTAATTCTAAGCTCCATTTGATTGCTAATGGAAACAATGTCGGTTTCACCAACGTGGAAAAAGGTGAAAATTGTGTTATAGAGGTTGAACAACAAAAGCATGAAATGAAAGTACCAAGTCTTGTAGCTAGGTTGATGGGTCTAGAATCAATTCCAGCTTCAAAGAGAGATAAGTCGGAGAAATCTTCCTTTTCTGATAGTGATGATGGGGAGGAGTCTTTCGAAATCGGGGTTGCAAATGCAAGGCATGATTCAAGGCCTCAGAAGCTTCGGAAAACGGAGGCAAACGAGAGAAGGGCAGTGACTAGGTTTGGTGCTGAGGCATTGCAAATCAAGAGTGTTTTGTCGCAAGTGAGAAAGTATAATCATCATCATCA 425 0.4047 NAKQDSLKRFKGDEKMPNSKLHLIANGNNVGFTNVEKGENCVIEVEQQKHEMKVPSLVARLMGLESIPASKRDKSEKSSFSDSDDGEESFEIGVANARHDSRPQKLRKTEANERRAVTRFGAEALQIKSVLSQVRKYNHHH 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33369g00001 141 MobiDBLite consensus disorder prediction 66 113 - -
Trme33369g00001 141 Pfam DUF761-associated sequence motif 46 73 IPR032795 -
Trme33369g00001 141 MobiDBLite consensus disorder prediction 67 84 - -
Trme33369g00001 141 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 7 140 - -
Trme33369g00001 141 MobiDBLite consensus disorder prediction 91 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme33369g00001 Trme-Chr33369 354 1127 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme33369g00001 8 141 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 47.297 1.57e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme33369g00001 - - tpra:123910908 244.973