Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33223g00001 GGACCACAATATGTTTGTACAACTTTCTCAACATTTGTCTGCACAAATTGCAGTGGACTACATCGAGAGTTCACACATCGAGTAAAATCTGTGTCAATGGCAAAATTTACACCAGAAGAAGTTACTGCTCTTCAAGCTGGTGGCAATGAGAGAGCAAAGCAGATTTATTTTAAAGGGTGGGATCCTCTACGGCATTCTTATCCCGATTCTAGGTAA 216 0.4074 GPQYVCTTFSTFVCTNCSGLHREFTHRVKSVSMAKFTPEEVTALQAGGNERAKQIYFKGWDPLRHSYPDSR 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33223g00001 71 Gene3D Arf GTPase activating protein 1 71 IPR038508 -
Trme33223g00001 71 PANTHER ARFGAP/RECO-RELATED 1 70 IPR044820 GO:0005096
Trme33223g00001 71 Pfam Putative GTPase activating protein for Arf 2 62 IPR001164 GO:0005096
Trme33223g00001 71 SUPERFAMILY ArfGap/RecO-like zinc finger 1 68 IPR037278 -
Trme33223g00001 71 PRINTS HIV Rev interacting protein signature 28 49 IPR001164 GO:0005096
Trme33223g00001 71 PRINTS HIV Rev interacting protein signature 10 27 IPR001164 GO:0005096
Trme33223g00001 71 ProSiteProfiles ARF GTPase-activating proteins domain profile. 1 56 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme33223g00001 Trme-Chr33223 585 1067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme33223g00001 2 56 C2H2 Transcription Factor Family AT4G05330 35.593 7.94e-07 42.4