Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme331929g00001 ATGGACCTTTTTGACGAGTGCTTGTTGATTGTTGAGAGGTGTCTTGCTGATGCTAAGATGGACAAGAGCAGTGTTGATGATGTTGTCCTTGTTGGTGGCTCGTCTAGGATTCCCAAAGTGCAGCAACTATTGCAAGACTTCTTCGAGGGCAAGGAATTGTGCAAGAGCATCAACCCTGACGAGGCTGTTGCTTATGGTGCTGCTGTCCAGGCTGCTTTGTTGAGTGAAGACAGTAAGAATGTTCCAAACTTGGTGCTGATCGATGTCGCACCGCTCTCTCTAGGTTGGA 289 0.481 MDLFDECLLIVERCLADAKMDKSSVDDVVLVGGSSRIPKVQQLLQDFFEGKELCKSINPDEAVAYGAAVQAALLSEDSKNVPNLVLIDVAPLSLGW 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme331929g00001 96 Gene3D - 55 72 - -
Trme331929g00001 96 FunFam heat shock 70 kDa protein-like 48 76 - -
Trme331929g00001 96 ProSitePatterns Heat shock hsp70 proteins family signature 3. 28 42 IPR018181 -
Trme331929g00001 96 PANTHER HEAT SHOCK PROTEIN 70KDA 1 95 IPR013126 GO:0005524|GO:0140662
Trme331929g00001 96 SUPERFAMILY Actin-like ATPase domain 2 75 IPR043129 -
Trme331929g00001 96 Gene3D - 7 54 - -
Trme331929g00001 96 Pfam Hsp70 protein 2 95 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme331929g00001 Trme-Chr331929 1 289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme331929g00001 1 95 Calmodulin-binding Proteins AT3G12580 78.125 7.58e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme331929g00001 K03283 - gmx:100804476 140.584