Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme331306g00001 ATGGTTTTCACTTACCGCAATGTAGCCTCTGGATTCGCCGTGAAGCTTACACCAGAAGAAGCCAAATCTCTTCAAGAAAAAGGGGAAATTGTGTCAGCAAGACCTGAAAGAACACTTTCATTACATACAACTCATACTCCAACTTTCTTGGGGTTAAAGCAAGGACAGGGATTGTGGAGCGATGATAACCTTGGAAAAGGCGTTATCATTGGAGTCATAGACACAGGAATATACCCTTTTCATCCATCATTCAACGACGAAGGAATGCCGCCACCACCTGCAAAATGG 288 0.4375 MVFTYRNVASGFAVKLTPEEAKSLQEKGEIVSARPERTLSLHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGVIDTGIYPFHPSFNDEGMPPPPAKW 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme331306g00001 96 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 70 81 IPR023827 -
Trme331306g00001 96 Pfam Peptidase inhibitor I9 4 42 IPR010259 -
Trme331306g00001 96 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Trme331306g00001 96 SUPERFAMILY Subtilisin-like 6 86 IPR036852 GO:0004252|GO:0006508
Trme331306g00001 96 Gene3D Peptidase S8/S53 domain 43 96 IPR036852 GO:0004252|GO:0006508
Trme331306g00001 96 ProSiteProfiles Serine proteases, subtilase domain profile. 49 96 - -
Trme331306g00001 96 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 96 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme331306g00001 Trme-Chr331306 1 288 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme331306g00001 1 96 Subtilisin-like Serine Gene Family AT3G14067 43.750 3.13e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme331306g00001 - - gmx:100777577 182.185