Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32963g00001 ATGTTAGTCTCTTTAATTTTGAGTGATGGTAAATATTTTGATTGGATTAGCATCCCAATCAAGAGGGAGATTTCTATCATGAAGCTAGTCAGGCATCCATATGTCGTTCGCCTACATGAGGTTCTGGCAAGCCGTACTAAGATTTATATCATATTGGAGTTCATCACAGGTGGTGAATTATTTGATAAAATTGTACACCACGGGCGTCTTAGTGAAGCTGAAGCTAGAAGATACTTCCAACAGCTTATTGATGGTGTAGATTATTGCCACAGTAAAGGAGTTTATCATAGAGATTTAAAGGTTTGCATTGACTCGGGTCTGGAATGCTTTCTTCATCCATATCATGATTTCTTCTAA 357 0.3754 MLVSLILSDGKYFDWISIPIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVHHGRLSEAEARRYFQQLIDGVDYCHSKGVYHRDLKVCIDSGLECFLHPYHDFF 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32963g00001 118 SMART serkin_6 3 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme32963g00001 118 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 20 101 - -
Trme32963g00001 118 Gene3D Transferase(Phosphotransferase) domain 1 11 102 - -
Trme32963g00001 118 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme32963g00001 118 SUPERFAMILY Protein kinase-like (PK-like) 20 100 IPR011009 -
Trme32963g00001 118 Pfam Protein kinase domain 20 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32963g00001 Trme-Chr32963 11 1072 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32963g00001 20 100 CBL-interacting serine-threonine protein kinases AT4G24400 90.123 8.10e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trme32963g00001 Pkinase 4.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32963g00001 - - qsa:O6P43_015426 166.777