Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme329579g00001 GATATTGAAGATTTGAGAAGACAAGTTGAAATCATGAGGCATTTACCTGAACATCCTAACATTGTTTCGTTGAAGTATACTTATGAAGATGAAGATGATGTTCATCTTGTTATGGAACTCTGTAAAGGTGACCTTCTCAATCGCATCGTCCGTAGAGGATACTACACCGAACGCTCCGCAGCTTGTGTCATTAAAACCGTCGTTGAAGTTGTTCAGGTGATAAATTTAAACAGTTTATGTTTGTCCCTATAG 252 0.381 DIEDLRRQVEIMRHLPEHPNIVSLKYTYEDEDDVHLVMELCKGDLLNRIVRRGYYTERSAACVIKTVVEVVQVINLNSLCLSL 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme329579g00001 83 ProSiteProfiles Protein kinase domain profile. 1 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme329579g00001 83 PANTHER SERINE/THREONINE-PROTEIN KINASE 2 76 - -
Trme329579g00001 83 Gene3D Phosphorylase Kinase; domain 1 23 40 - -
Trme329579g00001 83 Pfam Protein kinase domain 4 74 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme329579g00001 83 SUPERFAMILY Protein kinase-like (PK-like) 3 74 IPR011009 -
Trme329579g00001 83 Gene3D Transferase(Phosphotransferase) domain 1 4 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme329579g00001 Trme-Chr329579 2 253 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme329579g00001 1 73 EF-hand Containing Proteins AT3G57530 72.973 4.45e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme329579g00001 Pkinase 1.5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme329579g00001 K13412 - zju:107432385 112.079