Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32937g00001 ATCATGGAGAGTGGAGAGCAGATAGGCTTGAAGCATTTTAAGCCAATTAAACCTTTAGGGTCAGGCGACACCGGAAGTGTCCATCTGGTGGAGCTATGTGGAACTAATCAACAGTTTGCCATGAAGGCTATGGAGAAGAGTGTTATGCTCAATCGTAATAAGGTGCATAGAGCTTGCACGGAGAGAGAAATCCTAGACATGTTGGACCACCCTTTTCTTCCAGCATTATATGCTTCTTTTCAGACCAAAACACATATTTGTTTGATAACTGATTACTGTCCTGGAGGAGAACTATTCTTGCTTCTTGAGCGCCAGCCAGCAAAGGTTCTCAAGGAAGATGCAGTCAGTCTCTGTAAGTTTTTCTACATTGATGTTACTGACCATTAA 387 0.4264 IMESGEQIGLKHFKPIKPLGSGDTGSVHLVELCGTNQQFAMKAMEKSVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLERQPAKVLKEDAVSLCKFFYIDVTDH 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32937g00001 128 PANTHER FLIPPASE KINASE 1-RELATED 6 123 - -
Trme32937g00001 128 FunFam LOV domain-containing protein 12 96 - -
Trme32937g00001 128 Gene3D Phosphorylase Kinase; domain 1 2 126 - -
Trme32937g00001 128 SUPERFAMILY Protein kinase-like (PK-like) 8 114 IPR011009 -
Trme32937g00001 128 SMART serkin_6 13 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme32937g00001 128 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Trme32937g00001 128 ProSiteProfiles Protein kinase domain profile. 13 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme32937g00001 128 Pfam Protein kinase domain 14 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32937g00001 Trme-Chr32937 172 1101 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32937g00001 1 125 AGC Kinase Gene Family AT3G45780 80.800 2.70e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trme32937g00001 Pkinase 1.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32937g00001 K20715 - qsa:O6P43_000268 227.254