Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32861g00001 ATGTCCTATAAGCAATTCATTCAGGAGCTTGAAGATGACATACTGCCATCTGAAGCTGAGCGTAGATACCAAGAGTACAAATCAGAGTACGTTACTACCCAAAAGCGTGCTTATTTCAATGCTCACAAAGATGAGGCATGGTTGAAAGATAAATATCATCCAACAAATTTACTGACAGTAATTGAAAGGAGGAATGAAAATGCTCGACGTCTGGCAAAGGATTTTTTGCTTGATTTGCAAAGCGGAACACTAGACATAAATCCGGGTTTAAACTCTGCWCCCGCTAGATCAGAGCAAGCCAGCGAGCCAAATTCAGAGGAGGAAACAGATGCCGGTGATAAACGAAGAAGACATGGTAGGGGATCTAATAAGGATAATGACTTCTCTGCTGCTCCAAAGGCTCACCCTGTCAGTTGTGAACCTAAAAGGATACAGGCAGATATTCAACAGGTTCAGGCTGTTGTTCGTAAGCTTGAC 477 0.4256 MSYKQFIQELEDDILPSEAERRYQEYKSEYVTTQKRAYFNAHKDEAWLKDKYHPTNLLTVIERRNENARRLAKDFLLDLQSGTLDINPGLNSAPARSEQASEPNSEEETDAGDKRRRHGRGSNKDNDFSAAPKAHPVSCEPKRIQADIQQVQAVVRKLD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32861g00001 159 MobiDBLite consensus disorder prediction 84 100 - -
Trme32861g00001 159 MobiDBLite consensus disorder prediction 101 124 - -
Trme32861g00001 159 Pfam SERRATE/Ars2, N-terminal domain 4 85 IPR021933 -
Trme32861g00001 159 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 159 IPR039727 GO:0006397
Trme32861g00001 159 MobiDBLite consensus disorder prediction 83 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32861g00001 Trme-Chr32861 170 1135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32861g00001 1 159 C2H2 Transcription Factor Family AT2G27100 68.750 5.65e-70 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32861g00001 K27103 - lja:Lj0g3v0104559.1 276.944