Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme328380g00001 GCAAGTGTATTCGGCAATGGCAAAGGAACGGCAAGTGGTGGATCACCAAAAGCCCGAGTTGCGGCCTATAAGGTTTGTTGGCCACCCCTTGCCGTGGGTGGTGGATGTTACGAAGCAGACATTTTGTCTGCTTTTGAAGCCGCCATAAGTGACGGCGTAGATGTTCTTTCGGTGTCTTTGGGTGGCAGTAATGTCGAATTTTTGGAAAGCGGTATTTCTATAGGGTCTTTTCATGCAGTTGCCAAGGGCATTGTTGTAGTGAGTTCTATAGGAAATTCAGGACCTACTCCCTTCAGTGCATCTAACTTGGAACCATGGACCATCACAGTTGC 332 0.4819 ASVFGNGKGTASGGSPKARVAAYKVCWPPLAVGGGCYEADILSAFEAAISDGVDVLSVSLGGSNVEFLESGISIGSFHAVAKGIVVVSSIGNSGPTPFSASNLEPWTITVA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme328380g00001 111 SUPERFAMILY Subtilisin-like 8 111 IPR036852 GO:0004252|GO:0006508
Trme328380g00001 111 ProSiteProfiles Serine proteases, subtilase domain profile. 1 111 - -
Trme328380g00001 111 Gene3D Peptidase S8/S53 domain 1 111 IPR036852 GO:0004252|GO:0006508
Trme328380g00001 111 Pfam Subtilase family 6 97 IPR000209 GO:0006508|GO:0008236
Trme328380g00001 111 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 111 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme328380g00001 Trme-Chr328380 2 333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme328380g00001 2 110 Subtilisin-like Serine Gene Family AT2G04160 63.303 1.99e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme328380g00001 - - mdm:103447209 170.629