Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32827g00001 ATGAATCACTGTATGTTTGATGGAATTGGAGCTATGGAGTTTGTGAACTCATGGGGAGAATTAGCAAGAGGCCAACCACTCTCAATCCCTCCAATTCTAGACAGAACCATTCTAAAGGCGCGAAATCCGCCAAAGATAGAGCATTTGCACCAAGAATTTGCTGACATTGAAGACAAATCAAATACAAATAGCTTATATGATGATGAAATGGTGTATAGATCATTCTGTTTTGATCTTGAGAAACTAAAAGAATTGAAGAAAAAAGCTATGGAAGATGAAAATGGTGTTCTTGAATCTTGCACAACATTTGAAGTTCTTTCAGCATTTGTTTGGATAGCTAGAACAAAAGCACTTAAACTTTTGCCAGAACAAGAAACAAAGCTTCTTTTTGCTGTTGATGGAAGGGCAAAATTTGAACCAAAACTTCCAAAAGG 434 0.3641 MNHCMFDGIGAMEFVNSWGELARGQPLSIPPILDRTILKARNPPKIEHLHQEFADIEDKSNTNSLYDDEMVYRSFCFDLEKLKELKKKAMEDENGVLESCTTFEVLSAFVWIARTKALKLLPEQETKLLFAVDGRAKFEPKLPKG 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32827g00001 145 Pfam Transferase family 1 144 - -
Trme32827g00001 145 Gene3D - 53 145 IPR023213 -
Trme32827g00001 145 Gene3D - 1 52 IPR023213 -
Trme32827g00001 145 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32827g00001 Trme-Chr32827 22 455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32827g00001 1 145 Monolignol Biosynthesis Gene Families AT5G48930 37.086 7.69e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32827g00001 K15400 - gmx:100804504 241.506