Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32805g00001 ATAAAGGATATGGCGCTAAAGTTTTCGGGTGCTTACAAGCAATGCAAACCCTGCACAGGAGGATCAAGCAGCTACAACAAGAAAGGACATAGACCATATCCAGATTTTGACACAATCTCAGAAGGTGTTCCATACCCTTATATTGGAGGTGCAAGTTCAAGTTCAACCCCTGCATGGGACTTCACTACCTCTAACTACCCTGGTGCAAGATATGCCGGAGACCGTACCCCTAGAGGACGTGACTCTGCATCCGTCTGTGATGTAGTTTTAGAGGATGAGGATGAACCTAAGGAATGGATGGCACAAGTTGAGCCAGGGGTTCATATTACCTTTGTTTCTCTTCCTAATGGTGGAAATGATCTCAAGAGAATTCGTTTCAGATCTCCCTCATCCAAACCAATTAACAACTGA 411 0.4477 IKDMALKFSGAYKQCKPCTGGSSSYNKKGHRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTTSNYPGARYAGDRTPRGRDSASVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFRSPSSKPINN 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32805g00001 136 Pfam Transcription factor regulating root and shoot growth via Pin3 97 127 IPR013591 -
Trme32805g00001 136 ProSiteProfiles BRX domain profile. 97 136 IPR013591 -
Trme32805g00001 136 Pfam Transcription factor BRX N-terminal domain 1 18 IPR027988 -
Trme32805g00001 136 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 127 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32805g00001 Trme-Chr32805 498 1006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32805g00001 1 126 Major Intrinsic Protein MIP AT1G31880 69.697 2.54e-55 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32805g00001 - - gmx:100785003 243.432