Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme327905g00001 TGCGATGGATCGATCTTACTTGATGATACGTACACACTTAAAGGTGAGAAGAAAGCAGCTACAAACATCCACTCTTTAAAAGGCTTTGAAGTTATCGATAAAATCAAGAACTTTGTTGAATCAGAATGTCCCGGAATTGTTTCTTGTGCTGATATTCTCACAATTGCAGCTAGAGATGCTGTGATTCTGGTTGGTGGACCATATTGGGATGTTCCTGTTGGAAGGAAGGATTCTG 235 0.4 CDGSILLDDTYTLKGEKKAATNIHSLKGFEVIDKIKNFVESECPGIVSCADILTIAARDAVILVGGPYWDVPVGRKDS 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme327905g00001 78 PANTHER PEROXIDASE 72-RELATED 1 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme327905g00001 78 PRINTS Haem peroxidase superfamily signature 65 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme327905g00001 78 PRINTS Haem peroxidase superfamily signature 47 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme327905g00001 78 Gene3D - 1 78 - -
Trme327905g00001 78 PRINTS Plant peroxidase signature 46 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme327905g00001 78 PRINTS Plant peroxidase signature 27 40 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme327905g00001 78 PRINTS Plant peroxidase signature 65 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme327905g00001 78 SUPERFAMILY Heme-dependent peroxidases 1 78 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme327905g00001 78 ProSiteProfiles Plant heme peroxidase family profile. 1 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme327905g00001 78 Pfam Peroxidase 1 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme327905g00001 Trme-Chr327905 2 333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme327905g00001 1 78 Peroxidase AT1G68850 76.923 7.06e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme327905g00001 K00430 - gmx:100780750 148.673