Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme327609g00001 CTGCTACAGAAGGAGGCACCAAAGCGGTTAGGTTGTGGAGCTAAAGGGATTGAGGAAATTAAAGGGCACAAGTGGTTCAAACCAATCAATTGGAAGAAGTTGGATGCACGCGAAATCGAACCAAGCTTTCGTCCAGACGTAGCTGGGAAGCACTGTGTTGCCAATTTTGAGAAGCGCTGGACTGATATGCCTGTTGTTGATTCACCAGCTGCAAGCCCAAATGGCGGAAACCCCTTCAAGGACTTCTCTTATGTGCGACCTGCAGCCT 268 0.4925 MLQKEAPKRLGCGAKGIEEIKGHKWFKPINWKKLDAREIEPSFRPDVAGKHCVANFEKRWTDMPVVDSPAASPNGGNPFKDFSYVRPAA 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme327609g00001 89 SUPERFAMILY Protein kinase-like (PK-like) 1 76 IPR011009 -
Trme327609g00001 89 Gene3D Transferase(Phosphotransferase) domain 1 1 45 - -
Trme327609g00001 89 SMART pkinase_C_6 27 86 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trme327609g00001 89 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 87 - -
Trme327609g00001 89 Gene3D Phosphorylase Kinase; domain 1 46 68 - -
Trme327609g00001 89 ProSiteProfiles AGC-kinase C-terminal domain profile. 27 89 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trme327609g00001 89 Pfam Protein kinase C terminal domain 47 84 IPR017892 GO:0004674|GO:0005524|GO:0006468
Trme327609g00001 89 MobiDBLite consensus disorder prediction 67 89 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme327609g00001 1 87 AGC Kinase Gene Family AT3G08720 64.444 5.91e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme327609g00001 K04688 - gmx:100805922 173.326