Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme327183g00001 GTTATCACTGTTCCTGCTCACTTCAACAACTCACAGAGACAAGCTACAAAAGATGCAGGAAAAGTTGCTGGTTTTAATAAGATGAGGATCATCAATGAACCTACTGCAGCTGCTATTGCTTATGGTTTGGACAAGAAAAACTGGAGAGAAGGTGAGAAGAATGTGCTTGTGTTTGATCTTGGTGGTGGAACTTTTGATGTTTCCTTGGTGACTGTTGATGAAGGAATGTTCAAGGTTAAGGCTACCCTAGGAGATACTCATTTGGGTGGTGTTGATTTTGATAATAATTTGGTGAATCGTCTTGTGGAGTTGTTTAAGAGAAAGTACAAGAAG 333 0.3964 VITVPAHFNNSQRQATKDAGKVAGFNKMRIINEPTAAAIAYGLDKKNWREGEKNVLVFDLGGGTFDVSLVTVDEGMFKVKATLGDTHLGGVDFDNNLVNRLVELFKRKYKK 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme327183g00001 111 Gene3D Actin; Chain A, domain 4 89 111 - -
Trme327183g00001 111 Pfam Hsp70 protein 1 110 IPR013126 GO:0005524|GO:0140662
Trme327183g00001 111 ProSitePatterns Heat shock hsp70 proteins family signature 2. 57 70 IPR018181 -
Trme327183g00001 111 Gene3D - 46 88 - -
Trme327183g00001 111 PANTHER HEAT SHOCK PROTEIN 70KDA 1 111 IPR013126 GO:0005524|GO:0140662
Trme327183g00001 111 Gene3D - 1 45 - -
Trme327183g00001 111 SUPERFAMILY Actin-like ATPase domain 1 102 IPR043129 -
Trme327183g00001 111 FunFam Endoplasmic reticulum chaperone BiP 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme327183g00001 Trme-Chr327183 1 333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme327183g00001 1 111 Calmodulin-binding Proteins AT5G02500 76.577 1.83e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme327183g00001 K03283 - gmx:100788531 198.749