Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32648g00001 ATGACATTCTTCTTTCTTGGATTAACTGGGATATTTGGAAACCAGCTGTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCTTTACAACCAGCTATTCCTGTCTTTACCTTTCTGCTTGCTGTGATCATGGGTGTAGAAAGAGTGAATTTGCAGAGTTTTGAAGGTCTAGCAAAGGTTGGAGGAACTATTGTATGTGTTTCGGGTGCCATATTGATGGTTTTGTATCGCGGTCCATCTTTGATAGGTTATACCGAACCGGTCATTATACCACAACATGAAATAAGTGTCGGTGATCAGCTACAGCCTTCTGGATGGTTGATTACTGGTTTACAGGACCTTGGAATAGATAATTTTCAACTTGGAGTTGTGTTCCTGATAGGAAACTGTATGTGCATGGCTGCTTTCCTAGCCATCCAG 432 0.4051 MTFFFLGLTGIFGNQLLFLIGLSYTNPTYAAALQPAIPVFTFLLAVIMGVERVNLQSFEGLAKVGGTIVCVSGAILMVLYRGPSLIGYTEPVIIPQHEISVGDQLQPSGWLITGLQDLGIDNFQLGVVFLIGNCMCMAAFLAIQ 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32648g00001 144 SUPERFAMILY Multidrug resistance efflux transporter EmrE 3 80 - -
Trme32648g00001 144 PANTHER WAT1-RELATED PROTEIN 3 142 IPR030184 GO:0016020|GO:0022857
Trme32648g00001 144 Pfam EamA-like transporter family 3 65 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32648g00001 Trme-Chr32648 144 1119 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32648g00001 9 144 Nodulin-like Gene Family AT3G45870 61.765 8.55e-51 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32648g00001 - - gmx:100787738 224.942