Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme326124g00001 AAAGCTAGAGCTGTAAAAGCCGGGATAGTTGCTGCATTGATACGGTTTATGAAGGATGCGGGGGGTGGGATGGTTGACGAAGTGCTAGCCATAATGGCGATCCTTGCAAGCCATAACGAAGGCAGGATAGCAATCAGTCAGGCCGAGCCAACCCCTATTTTAGTTGAGGTTATACGAACCGGATCACCGTGTAACTGGGAGAATGCTGCTGCTGTTTTGTGGTCAGTATGCCCGGGAGATTTACTGCAATTGAAACTAGCAAAGGAACTTGGAGCAGAAGAAGCACTTCAGGGATTATCAGAAAATGGAACTGATAGAGCTAAGAGAAAAGCT 333 0.4715 KARAVKAGIVAALIRFMKDAGGGMVDEVLAIMAILASHNEGRIAISQAEPTPILVEVIRTGSPCNWENAAAVLWSVCPGDLLQLKLAKELGAEEALQGLSENGTDRAKRKA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme326124g00001 111 PANTHER U BOX DOMAIN-CONTAINING 1 111 - -
Trme326124g00001 111 SUPERFAMILY ARM repeat 4 104 IPR016024 -
Trme326124g00001 111 Gene3D - 1 111 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme326124g00001 Trme-Chr326124 2 334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme326124g00001 1 111 U-box Gene Family AT3G54850 63.964 1.83e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme326124g00001 - - vvo:131594834 184.882