Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32544g00001 GTAACGCGGTCGCGAAGCTGGTCTTTTGTGGAGCGTCCAGGTTTGTTACTTGTAGCAGCCTTCGTCATTGCTCAACTGATAGCTACATTGATTGCAGTTTATGCAAATTGGAGTTTTGCTGCGATTGAAGGAATTGGATGGGGTTGGGCTGGTATTGTTTGGCTTTATAATCTCATATTTTATATTCCGCTTGATTTTATCAAGTTTATAACCCGATATGCATTGAGCGGCCGGGCTTGGGATCTTGTTATCGAACAAAGGATTGCTTTTACAAGAAAGAAAGATTTTGGAAAGGAAGAACGTGAACTTAAATGGGCGCATGCGCAGAGGACACTTCACGGTCTTCACCCCCCAGAGACCAAGATATTCAACGAACGCACAAATCATACTGCGCTTAATCAGATGGCTGAAGAAGCTAAAAGACGGGCAGAGATTGCAAG 440 0.4386 VTRSRSWSFVERPGLLLVAAFVIAQLIATLIAVYANWSFAAIEGIGWGWAGIVWLYNLIFYIPLDFIKFITRYALSGRAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHPPETKIFNERTNHTALNQMAEEAKRRAEIA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32544g00001 146 Coils Coil 129 146 - -
Trme32544g00001 146 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 75 IPR023298 -
Trme32544g00001 146 Gene3D - 1 74 - -
Trme32544g00001 146 PANTHER CALCIUM-TRANSPORTING ATPASE 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32544g00001 Trme-Chr32544 281 1139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32544g00001 1 146 Primary Pumps ATPases AT3G47950 82.192 9.13e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32544g00001 K01535 - gmx:100818268 282.722