Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme325412g00001 CCTGACCCTGCAATCGATCCCGGTTTTAGAGCAGAGCTTGACAAGCTATGTTCACTCGATGTTGATCAAAATAAGACTGGGAACCTCGATGCAACTCCGGTGATTTTCGATAATCAATATTTCAAGGACTTGGTTGGTGGAAGAGAATTTCTTAACTCCGATCAAACACTTTTCACATTCCCTCAGACACAAGGGTTTGTGAGGGCATTTAGTATTGATCAGAATGAGTTTTTCAAAGCATTTGTTGAAGGAATGTTGAAATTGGGTGATTTGTGTAACACCCTAACCCTCAAACGAGTTTTATTAACTTAA 312 0.3974 PDPAIDPGFRAELDKLCSLDVDQNKTGNLDATPVIFDNQYFKDLVGGREFLNSDQTLFTFPQTQGFVRAFSIDQNEFFKAFVEGMLKLGDLCNTLTLKRVLLT 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme325412g00001 103 ProSiteProfiles Plant heme peroxidase family profile. 1 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme325412g00001 103 Coils Coil 102 103 - -
Trme325412g00001 103 SUPERFAMILY Heme-dependent peroxidases 1 91 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme325412g00001 103 Pfam Peroxidase 1 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme325412g00001 103 Gene3D Peroxidase, domain 2 1 88 - -
Trme325412g00001 103 PANTHER - 2 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme325412g00001 Trme-Chr325412 2 313 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme325412g00001 1 91 Peroxidase AT2G22420 67.033 9.78e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme325412g00001 K00430 - fve:101312090 150.984