Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32526g00001 ATGACACTTCTTCTYCGGTTTCAATTACGGCCATCCATYGCAATAGCCATCTCYGAACCYGGAGAATCATCAGAACGCAAYTATTCCAATTCAATGTTGAGAGGTCTGCAAGTTCTGTTAGTTGACAACGACGATGTAAATAGAGCAGTGACACAAAAACTGCTTCAGAAACTCGGTTGTTCCGTGACATCCACTTCTTCGGGATTCGAATGTCTTGCTATCATCGGACCTGTTGGATCTTCGGTTCAAGTCATTCTTTTGGATCTCCAAATGCCTGATATTGACGGCTTCGAAGTCGCAGCAAGGATTCGGAAGTTTAAAAGTGGAAATAGGCCTATCATTATTGCGTTAACCGCAAGTGCGGAAGAAGATTTGTGGGAAAGATGTATGCAGATTGGTGTTAACGGAGTAATCCGAAAACCGGTTTTGTTGCAAGGAATTGCTAGTGAACTCAGAAGAATTCTGATGCAAGGAAATATATAG 483 0.4203 MTLLLRFQLRPSIAIAISEPGESSERNYSNSMLRGLQVLLVDNDDVNRAVTQKLLQKLGCSVTSTSSGFECLAIIGPVGSSVQVILLDLQMPDIDGFEVAARIRKFKSGNRPIIIALTASAEEDLWERCMQIGVNGVIRKPVLLQGIASELRRILMQGNI 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32526g00001 160 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 1 157 - -
Trme32526g00001 160 FunFam Ethylene receptor 34 158 - -
Trme32526g00001 160 ProSiteProfiles Response regulatory domain profile. 37 155 IPR001789 GO:0000160
Trme32526g00001 160 SUPERFAMILY CheY-like 33 155 IPR011006 -
Trme32526g00001 160 CDD REC_ETR-like 36 151 - -
Trme32526g00001 160 SMART REC_2 36 155 IPR001789 GO:0000160
Trme32526g00001 160 Pfam Response regulator receiver domain 38 145 IPR001789 GO:0000160
Trme32526g00001 160 Gene3D - 36 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32526g00001 Trme-Chr32526 133 615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32526g00001 1 155 Miscellaneous Gene Families AT3G04580 58.599 2.07e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trme32526g00001 Response_reg 3.5e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32526g00001 K14509 - gmx:100101891 268.085