Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32513g00001 TCTTTCTTTGAAGTGATTCTCGAGCGGTTGGCTTCAGGCGATTTCAATGACTACTTCAGCAGAAACAATCTTGATGTTGAGCTTGTTGACAAACTTAGCATTACACTCAATTCTATAAATCAAGTGCTGGAAGAAGCAGAGAAAATGCAGTACAAAAGCACATATGTAAAGAAGTGGCTTGATGATCTTAAAGATGCTATATATGAGGCGGACCAAATTTCCGATGAGATTGCTACTGATGCACAACTGAATAAGCTGAAAGCTGAATCTGATTCTGTTACCAGCACAACATTTGAATCTAGGATCAAAGAACTAATAGGGATGCTAGAACTTCTTGTGAAGCAAAAGGAAATATTGGGATTGAAAGGAGGTGCTCGGTGTGCTAGTAATGAAGGTGGCATCAGCTGGAAATCGTTGAAAAAATTGCCAACTACATTGCCAGAGGACAAAGCGAATCTACATGGTAGAGATGTTGAGAAAGAGGAAATAATCAAATTTTTACTTTCAGATAATGATGGTAGCAACCGGGTACCCGTACTCAGCATAGTCGGTTTAGGTGGGATGGGTAAGACCACCCTTGCTGAGGTTGTGTATAATGACGATAGGATTAAGGAGCATTTTGAACGTATAGCTTGGGTCTATGTTTCAGAATATTTTGATGTTGTTCGACTTACCAAAGAAATAAGTAGTAGGTTGGATCATTCTTTAGAAGACGGAGAGGACTTGAATCTACTTCAACAACAACTGCATCAAAGAATAACAGGCAAGAAATATTTGCTTATTCTAGACGACGTTCGGAATGGCAAAGGTGAATGTTGGGAGCAGTTACTACTTCCCTTTAATCATGGATATTTTGGAAGTAAGATTATTGTGACAACACGTGACAAAGAGGTAGCATCAGTAATGAAATCCGCTCAGATACTTCATTTGAAGGAATTGGAGGAAAGCGATTGTTGGAGTTTATTTGTGAGACATGCTTTTTACGGCAAAAATGTAAGCGAATATCCAGATCTTGAATCAATTGGAAGGAAAATCGTAGACAAGTGTGGAGGGTCGCCTTTAGCTGTAAGAACATTGGGGGGTCTCTTGCGAATGAAATTTTCTCCAGATGAATGGGTGAAGATATTGGAGACAGATATG 1140 0.393 SFFEVILERLASGDFNDYFSRNNLDVELVDKLSITLNSINQVLEEAEKMQYKSTYVKKWLDDLKDAIYEADQISDEIATDAQLNKLKAESDSVTSTTFESRIKELIGMLELLVKQKEILGLKGGARCASNEGGISWKSLKKLPTTLPEDKANLHGRDVEKEEIIKFLLSDNDGSNRVPVLSIVGLGGMGKTTLAEVVYNDDRIKEHFERIAWVYVSEYFDVVRLTKEISSRLDHSLEDGEDLNLLQQQLHQRITGKKYLLILDDVRNGKGECWEQLLLPFNHGYFGSKIIVTTRDKEVASVMKSAQILHLKELEESDCWSLFVRHAFYGKNVSEYPDLESIGRKIVDKCGGSPLAVRTLGGLLRMKFSPDEWVKILETDM 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32513g00001 380 Gene3D - 5 117 - -
Trme32513g00001 380 PRINTS Disease resistance protein signature 252 266 - -
Trme32513g00001 380 PRINTS Disease resistance protein signature 179 194 - -
Trme32513g00001 380 PRINTS Disease resistance protein signature 349 363 - -
Trme32513g00001 380 FunFam Probable disease resistance protein At1g61300 139 306 - -
Trme32513g00001 380 Coils Coil 29 49 - -
Trme32513g00001 380 Pfam NB-ARC domain 159 377 IPR002182 GO:0043531
Trme32513g00001 380 PANTHER DISEASE RESISTANCE PROTEIN RP 35 376 IPR044974 GO:0006952
Trme32513g00001 380 Gene3D - 312 378 IPR042197 -
Trme32513g00001 380 Gene3D - 137 309 IPR027417 -
Trme32513g00001 380 Pfam Rx N-terminal domain 27 87 IPR041118 -
Trme32513g00001 380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 377 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32513g00001 Trme-Chr32513 1 1140 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32513g00001 179 371 WRKY Transcription Factor Family AT5G45050 28.141 4.17e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32513g00001 - - mtr:11414856 459.529