Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme325094g00001 CTACCAGGTGACTTTGGTTTTGATCCACTAGGACTTGGCAAGGACCCAGCATTTCTCAAATGGTACAGAGAAGCTGAGCTCATTCATGGAAGGTGGGCAATGGCTGCAGTCCTAGGTATCTTTGTTGGTCAGGCATGGAGTGGAGTTCCATGGTTTGAGGC 161 0.4969 LPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEA 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme325094g00001 54 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 52 IPR001344 GO:0009765|GO:0016020
Trme325094g00001 54 SUPERFAMILY Chlorophyll a-b binding protein 1 50 - -
Trme325094g00001 54 Gene3D Chlorophyll a/b binding protein domain 1 54 - -
Trme325094g00001 54 Pfam Chlorophyll A-B binding protein 1 49 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme325094g00001 Trme-Chr325094 174 334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme325094g00001 1 54 Chloroplast and Mitochondria Gene Families AT1G15820 98.148 1.70e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme325094g00001 K08917 - osa:4336028 121.709