Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme32484g00001 | ATGGAGGAGGATTTCGATTTGCCAACAGAGAGTGAAATGGAAATGCCTGGAGAAGAAGAAGAAGAGATGATGAGTCCGATCCACAAGGTTGGTGAGGAGAAGGAGATTGGTAACAATGGTTTGAAGAAGAAGCTTGTTAAGGAAGGTCAAGGATGGGAATCTCCTGATATTGGAGATCAAGTTGAAGTTCATTATACTGGAACTTTGCTTGATGGAACCAAATTTGATTCGAGCCGCGATAGGGCCACCACTTTCAAGTTTAAACTTGGTCAAGGGCAAGTGATCAAAGGATGGGATGAAGGTATCAAAACCATGAAGAAGGGTGAAAATGCTATTTTCACAATACCTCCAGAATTGGCTTATGGAGAGTCTGGGTCTCCTCCTACTATTCCACCAAATGCAACTCTTCAGTTTGATGTGGAGTTGCTGTCTTGGACTAGTGTCAAGGACATTACCAAGGATGGTGGGATATTGAAGAACATTGTAACTAAAGGGGAGAAATGGGATAATCCTAAGGATCTTGATGAAGTWTTTGTTAAGTATGAAGCTCGTCTTGAAGATGGGACGATTATTTCAAAATCTGACGGAGTCGA | 593 | 0.4182 | MEEDFDLPTESEMEMPGEEEEEMMSPIHKVGEEKEIGNNGLKKKLVKEGQGWESPDIGDQVEVHYTGTLLDGTKFDSSRDRATTFKFKLGQGQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDITKDGGILKNIVTKGEKWDNPKDLDEVFVKYEARLEDGTIISKSDGV | 197 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme32484g00001 | 197 | Gene3D | - | 3 | 147 | IPR046357 | GO:0003755 | |
| Trme32484g00001 | 197 | Gene3D | - | 148 | 197 | IPR046357 | GO:0003755 | |
| Trme32484g00001 | 197 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 53 | 143 | IPR001179 | GO:0003755 | |
| Trme32484g00001 | 197 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Trme32484g00001 | 197 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 58 | 146 | IPR001179 | GO:0003755 | |
| Trme32484g00001 | 197 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 26 | 149 | - | - | |
| Trme32484g00001 | 197 | SUPERFAMILY | FKBP-like | 150 | 194 | - | - | |
| Trme32484g00001 | 197 | SUPERFAMILY | FKBP-like | 30 | 150 | - | - | |
| Trme32484g00001 | 197 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Trme32484g00001 | 197 | FunFam | Peptidylprolyl isomerase | 31 | 149 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme32484g00001 | Trme-Chr32484 | 1 | 997 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme32484g00001 | 1 | 197 | Calmodulin-binding Proteins | AT5G48570 | 70.244 | 5.08e-96 | 288 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme32484g00001 | K09571 | - | gmx:100810243 | 340.117 |