Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme324370g00001 AAAACAATTGTGAACTCCACACGTGACACAAACGGTCATGGGACCCACACTTCAACGACAGCAGCCGGAAGCAGAGTTGATGGTGCATCTTTCTTTGGTTATGCAAATGGAACAGCAACGGGAATAGCTTCGTTGTCTAGAGTAGCCATATACAAGACTGTGTGGGGACCATATGCAGATGCACTTTCATCTGATGTAATAGCTGCAATTGATGCCGCAATATCAGACGGTGTTGATGTTCTTTCAATATCATTAGGCTATAACAATATTCCATTGTATGAAGATGCTATTGCTATAGCAACATTTGCAGCTATGGAAAAAG 322 0.4193 KTIVNSTRDTNGHGTHTSTTAAGSRVDGASFFGYANGTATGIASLSRVAIYKTVWGPYADALSSDVIAAIDAAISDGVDVLSISLGYNNIPLYEDAIAIATFAAMEK 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme324370g00001 107 MobiDBLite consensus disorder prediction 1 21 - -
Trme324370g00001 107 ProSiteProfiles Serine proteases, subtilase domain profile. 1 107 - -
Trme324370g00001 107 SUPERFAMILY Subtilisin-like 4 106 IPR036852 GO:0004252|GO:0006508
Trme324370g00001 107 Gene3D Peptidase S8/S53 domain 4 107 IPR036852 GO:0004252|GO:0006508
Trme324370g00001 107 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 5 107 IPR045051 -
Trme324370g00001 107 Pfam Subtilase family 5 89 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme324370g00001 Trme-Chr324370 12 333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme324370g00001 6 107 Subtilisin-like Serine Gene Family AT2G05920 59.804 2.55e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme324370g00001 - - lja:Lj0g3v0171039.1 133.265