Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32404g00001 ATGTCTGTTTCTTATTACTGGAGACTATCTGATGACATGCCAAAACCAGATAAGGTTCTGATTGTTGAAAGAGTAATTGAAACCTTGGGACTCCAGGCAATAAGAGATTCCCTTGTTGGGACAGTAGAGAGGCGAGGCATATCTGGTGGGCAACGAAAACGTGTAAATGTAGGGTTGGAGATGGTTATGGAGCCTTCATTGTTAATCTTAGATGAGCCTACAACTGGTCTAGACAGTGCATCTTCGACTTTACTGCTGAAAGCACTTCGCCGTGAAGCTGCTGAAGGGGTAAACATCTGCATGGTGCTTCACCAACCTAGGTAA 324 0.4444 MSVSYYWRLSDDMPKPDKVLIVERVIETLGLQAIRDSLVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSTLLLKALRREAAEGVNICMVLHQPR 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32404g00001 107 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 6 107 - -
Trme32404g00001 107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 106 IPR027417 -
Trme32404g00001 107 Gene3D - 2 107 IPR027417 -
Trme32404g00001 107 Pfam ABC transporter 22 74 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32404g00001 Trme-Chr32404 658 981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32404g00001 36 91 Calmodulin-binding Proteins AT2G36910 41.379 9.95e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32404g00001 - - lja:Lj5g3v0659620.1 179.489