Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32398g00001 TTCTCTGCAGCTAAGGAACTTTTGGTTGGAGGCAAAATAGATGCATGGAAGGTTCCATCTTCTGAAGAAGATTCACTCAATCGATGGGCAGAAAAGTCTCGTTTCAATGTCGGCGATCATCTTGTGTGGAAATATGATGGTGGAAAAGACTCAGTTTTGCAAGTTAACAAAGAAGATTATGCTAATTGCAACATCTCCAACCCAATTGAAGAGTACAAAGATGGGAACACTAAGGTGAAGCTAGACCGTTCTGGACCATTCTACTTCATCAGTGGAGCAAAGGGTCACTGTGAGAAGGGACAAAAGCTCACTGTGGTTGTTATTTCTCCAAGGCGAAGATACCGCGGAGTTTCTCCTGCACCTTCTCCAGCAGTGTTGGAATACAGTGGAGTTTCTCCTGCACTTTCTCCAGCAGAGTTGGAACAAGGTCCAGCTGTTGCTCCTACTAGCAGTGCTCCAGTGTTGCAAACTGGCCTTGTGATGGTTATGGGACTATTAGCTATTTAT 507 0.4458 FSAAKELLVGGKIDAWKVPSSEEDSLNRWAEKSRFNVGDHLVWKYDGGKDSVLQVNKEDYANCNISNPIEEYKDGNTKVKLDRSGPFYFISGAKGHCEKGQKLTVVVISPRRRYRGVSPAPSPAVLEYSGVSPALSPAELEQGPAVAPTSSAPVLQTGLVMVMGLLAIY 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32398g00001 169 FunFam Early nodulin-like protein 1 4 112 - -
Trme32398g00001 169 ProSiteProfiles Phytocyanin domain profile. 5 109 IPR003245 GO:0009055
Trme32398g00001 169 Gene3D - 3 111 IPR008972 -
Trme32398g00001 169 PANTHER BLUE COPPER PROTEIN 8 132 IPR039391 GO:0009055
Trme32398g00001 169 CDD OsENODL1_like 5 108 IPR041846 -
Trme32398g00001 169 SUPERFAMILY Cupredoxins 4 108 IPR008972 -
Trme32398g00001 169 Pfam Plastocyanin-like domain 16 101 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32398g00001 Trme-Chr32398 543 1142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32398g00001 1 166 Phytocyanin Superfamily AT2G25060 53.892 2.64e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32398g00001 - - tpra:123897354 332.028