Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32359g00001 ATGGTAACTGGTGAGGCAGCATATTCTACACTTTCTCCTGTGCAGGCTGCAGTTGGTATTGCTGCTTGTGGTCTTAGACCTGAAATTCCCAAGGACTGTCAACCTAATCTAAGATACATTATGACAAAATGCTGGAACAACACCCCTTCCAAACGTCCTAAGTTCTCCGATATTTTAGCCATATTGCTGCAACCATACAACAACAATAG 209 0.4258 MVTGEAAYSTLSPVQAAVGIAACGLRPEIPKDCQPNLRYIMTKCWNNTPSKRPKFSDILAILLQPYNNN 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32359g00001 69 Pfam Protein tyrosine and serine/threonine kinase 3 61 IPR001245 GO:0004672|GO:0006468
Trme32359g00001 69 SUPERFAMILY Protein kinase-like (PK-like) 1 62 IPR011009 -
Trme32359g00001 69 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 62 - -
Trme32359g00001 69 Gene3D Transferase(Phosphotransferase) domain 1 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32359g00001 Trme-Chr32359 169 377 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32359g00001 1 64 MAP Kinase Kinase Kinase AT4G35780 48.438 1.20e-18 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Trme32359g00001 PK_Tyr_Ser-Thr 4.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32359g00001 - - pvu:PHAVU_008G258400g 129.413