Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32345g00001 TGTCTGAATGAGGCGTCCTACCCTGTTCAGAGTGGATCTTTATCTTCACGTAAGGTGACCAGACACTTAACAGCGCAACATAGCCAGGAAAAGGATATCGGGAAAATGCAGTCTGGCTCATTCGCAAGAGCTGCAGATTCAAATATGCTAGTTTCTAATTGCGCCGAGTCTATGGATATAGATTCAGAAGCTACACAGTCACAACATACATNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNTACAGACCAGCAATGGATTGAATTTTGATGGTGCTGTTGCCAATGATTCGGAATCTGATGACAATGACCTGTACTTAGCAGAGTGCAGAATATCACTTGTTGGTTTTGAAGCTTCTGAAATGCGGAAGCTAGTTAATTTGGTGCGTAAAGGTGGAGGCTCTCGATACATGTCTTTGAATGATAAGTTGACGCATATAGTAATTGGGAATCCTACAGAAATGGAAAAGAAGGATGTAAGGAGTATTGCTGCTCTAGGTGTCGTTTATGTTGTTAAAACCTCATGGCTTGAAGATTGTGACCGTCAAAAGAAACAAGTCCCTGTTCTTCGACGACACATTGCA 609 0.381 CLNEASYPVQSGSLSSRKVTRHLTAQHSQEKDIGKMQSGSFARAADSNMLVSNCAESMDIDSEATQSQHTXXXXXXXXXXXXXXXXXXXXQTSNGLNFDGAVANDSESDDNDLYLAECRISLVGFEASEMRKLVNLVRKGGGSRYMSLNDKLTHIVIGNPTEMEKKDVRSIAALGVVYVVKTSWLEDCDRQKKQVPVLRRHIA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32345g00001 203 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 1 203 - -
Trme32345g00001 203 Gene3D BRCT domain 100 199 IPR036420 -
Trme32345g00001 203 SMART BRCT_7 112 192 IPR001357 -
Trme32345g00001 203 SUPERFAMILY BRCT domain 110 196 IPR036420 -
Trme32345g00001 203 Pfam BRCA1 C Terminus (BRCT) domain 112 188 IPR001357 -
Trme32345g00001 203 FunFam Transcription coactivator 92 202 - -
Trme32345g00001 203 ProSiteProfiles BRCT domain profile. 110 202 IPR001357 -
Trme32345g00001 203 Coils Coil 91 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32345g00001 Trme-Chr32345 301 1142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32345g00001 1 197 Core DNA Replication Machinery Family AT1G77320 47.716 3.18e-49 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32345g00001 K10728 - gmx:100804966 283.493