Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32340g00001 ATGATAGATAACCCGAAATGGAATGAAAACTTTCACATTTACTCAGCTCATTCAATCTCCAGTATCATATTCACTGTTAAACAAGACAAACCCATTGGAGCAACTCTAATTGGAAGAGCTTATGTTCCAGTTGAACAAGTCATAAAGGGTAACATAGTAAACACATGGATTCAAATATTAGATGTGGAACATCGTCCAATACAAGGTGGTTCCAAAATCCATGTTCAAATTCAATTCTCACATGTTAAAAATGATCCAAATTGGTCACAAGGACTAAAGAGTCCACAATTTCAAGGAGTTCCTCACACTTTCTTTAAACAAAGTAATGGTTGCCAAATCACTCTTTACCAAGATGCACATGTTATAGATGGTTCTATTCCGTATATTCCGTTGGACGGAGTAGAACGTTACGTGCCAGGAAAATGTTGGGAAGATATTTACAGTGCAATTAATGATGCTAAGCATTTTATTTGCATAACTGGTTGGTCTGTTTATACTGAAATAACCTTGATTAGGGACCTAAACAAGTCAACAGGAACAAGCATCACACTTGGAGAGCTTCTGAAGAAGAAAGCCAATGAAGGTGTTAATGTTCTTATGCTTGTTTGGGATGATAGAACTTCTGTTCCTGATTTTAAGAAAGATGGTTTGATGAAACTCATGATCAAGAAACGTATTTTAGAAACACAAATGTTCATTGCGTTTTGTGTCCGCGTAATCCATGTTCACTCATCATCAGAAGACTATAATTGTTGA 756 0.3598 MIDNPKWNENFHIYSAHSISSIIFTVKQDKPIGATLIGRAYVPVEQVIKGNIVNTWIQILDVEHRPIQGGSKIHVQIQFSHVKNDPNWSQGLKSPQFQGVPHTFFKQSNGCQITLYQDAHVIDGSIPYIPLDGVERYVPGKCWEDIYSAINDAKHFICITGWSVYTEITLIRDLNKSTGTSITLGELLKKKANEGVNVLMLVWDDRTSVPDFKKDGLMKLMIKKRILETQMFIAFCVRVIHVHSSSEDYNC 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32340g00001 251 Gene3D C2 domain 3 92 IPR035892 -
Trme32340g00001 251 Pfam C2 domain 4 58 IPR000008 -
Trme32340g00001 251 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 81 IPR035892 -
Trme32340g00001 251 SUPERFAMILY Phospholipase D/nuclease 85 208 - -
Trme32340g00001 251 PANTHER PHOSPHOLIPASE D 3 229 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32340g00001 Trme-Chr32340 362 1117 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32340g00001 4 218 Phospholipase D Gene Family (Wang group) AT3G15730 63.426 9.13e-95 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32340g00001 K01115 - gmx:100791688 318.546