Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme323327g00001 ATGTCTTTCATGGAAACAGATTTTGGTGTTAAACCAGCACCAAGTGTTGATTATTATAGTTCAAGAGGTCCATCATATAGTTGTCCATTTGTGTTGAAACCTGATATTACTGCGCCCGGTACTTCGATCTTAGCTGCATGGCCTACAAATGTTCCTGTGTTGGAATTGAAGTCT 174 0.3966 MSFMETDFGVKPAPSVDYYSSRGPSYSCPFVLKPDITAPGTSILAAWPTNVPVLELKS 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme323327g00001 58 Gene3D Peptidase S8/S53 domain 10 53 IPR036852 GO:0004252|GO:0006508
Trme323327g00001 58 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 51 IPR045051 -
Trme323327g00001 58 SUPERFAMILY Subtilisin-like 11 48 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme323327g00001 Trme-Chr323327 1 174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme323327g00001 1 49 Subtilisin-like Serine Gene Family AT5G67090 61.224 5.39e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme323327g00001 - - pvu:PHAVU_010G119000g 95.1301