Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme322596g00001 GAGAAACCTTCAACAGCAGGAGATGTATATAGTTTTGGGATAGTGTTACTAGAGCTCTTCTCCGGGAAAAGTCCACAAAATGATTGCTTCACTGGAGGCATGAGCATAACAAAATGGGTGCAATCAGCATTCAAAGACAAGACTGTTCAAGTCATTGACCCTCAGCTGCTATCATTCATTTTCCATGATGATTCTGATAGAGACTCCAATCAACAGCTTCATTGTGTGGATGCAATTATGGGAGTTGGCTTGTCCTGCGCTGCAGACAATTCAGATGATCGCATTGGCGTTAGAGTTGCTGTTCGCCAACTAAAAACTGCTAGGGACTCTCTTA 334 0.4311 EKPSTAGDVYSFGIVLLELFSGKSPQNDCFTGGMSITKWVQSAFKDKTVQVIDPQLLSFIFHDDSDRDSNQQLHCVDAIMGVGLSCAADNSDDRIGVRVAVRQLKTARDSL 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme322596g00001 111 Gene3D Transferase(Phosphotransferase) domain 1 1 108 - -
Trme322596g00001 111 SUPERFAMILY Protein kinase-like (PK-like) 3 104 IPR011009 -
Trme322596g00001 111 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme322596g00001 Trme-Chr322596 2 335 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme322596g00001 2 109 Receptor kinase-like Gene Family AT3G47570 31.481 2.14e-17 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trme322596g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme322596g00001 - - vvo:131603287 175.252