Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32256g00001 ATCACAGTACTTTTCTTTGCAAAAGAAGGTGACGGTTGTGTCCTTAACTCGACTAAGGAAAATGTTCTTGCACCTGTTACTATACATTTCCAGCAAGGTCTTGGCCAGAAGTTTAGACAACCATCTGGAACTGGTATCACTCTTTCAATGTTCGAGGAATCCGAGTTATTGAAAGTGGGCGACCTAGACGTCTATCCTGTAGCAGTTAAAGCAGATGCATCTTCCGGTGACGTGAACGGAACAAATGAAACTCCAACATCTGGTAATAAAACAAACACAAACTCTCAGATAACTCAAGCAGTGTTTGAGAAGGAGAAAGGAGAATTCCGGGTGAAGGTTGTTAAGCAGATATTGTGGGTGAATGGAATGAGGTATGAGCTGCAGGAGATATATGGTATTGGAACTTCAGTAGAGAGTGACTTGGATGGGAATGACCCCGGAAAAGAGTGTGTTATCTGCTTATCAGAACCTCGCGACACAACTGTCCTTCCTTGTCGCCACATGGTATTTACAGTTTCCTTTTTGTGA 528 0.428 ITVLFFAKEGDGCVLNSTKENVLAPVTIHFQQGLGQKFRQPSGTGITLSMFEESELLKVGDLDVYPVAVKADASSGDVNGTNETPTSGNKTNTNSQITQAVFEKEKGEFRVKVVKQILWVNGMRYELQEIYGIGTSVESDLDGNDPGKECVICLSEPRDTTVLPCRHMVFTVSFL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32256g00001 175 MobiDBLite consensus disorder prediction 75 93 - -
Trme32256g00001 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 173 IPR013083 -
Trme32256g00001 175 PANTHER MAHOGUNIN 1 169 IPR045194 GO:0061630
Trme32256g00001 175 MobiDBLite consensus disorder prediction 74 93 - -
Trme32256g00001 175 SUPERFAMILY RING/U-box 149 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32256g00001 Trme-Chr32256 612 1139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32256g00001 1 169 C3H Transcription Factor Family AT3G09770 63.429 7.06e-69 211