Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32227g00001 AAAGAGTCATGGAGCGAAGAGGAGGACGGAGTACTGATTGAAGTTCACAAGATTGTCGGGAACAAGTGGGCTGAAATTGCAAAGAGTTTGCCTGGTCGCACCGAGAACTCTATCAAGAACCACTGGAACGCCACTAAGCGCAGCCAGAACGCCAAAATGAGGCAGAACAGGCGGAATAGTTTGAAGGGAACACTACTTCAGAAATACATCAGTGAAGTCACTGCTGCTAAGGAAGCTGAGAAGGAGCTGATGAATATTGAGAATCAACAAAATTTCGAAAGTTCGGAGAGTGATTACAATTCTGAAGGTTTGGCTACTCCAGAGGATGAAATTGAAGACTATGTTCCAATGATGTTCAATGGTACTGCTGATTATGGAATGGCAAGTGGTTCTGGCACCACAATGAATTATGATTTTGGATCATATGGAATGGCAAGTGGTTCTGGCACAACAATGAATTATGAGTTTTATCCTGAGGTTCCTATGAAGCAGGAACTTGATCTCATGGAGATGATCTATAGAAACAACCCTTAA 534 0.427 KESWSEEEDGVLIEVHKIVGNKWAEIAKSLPGRTENSIKNHWNATKRSQNAKMRQNRRNSLKGTLLQKYISEVTAAKEAEKELMNIENQQNFESSESDYNSEGLATPEDEIEDYVPMMFNGTADYGMASGSGTTMNYDFGSYGMASGSGTTMNYEFYPEVPMKQELDLMEMIYRNNP 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32227g00001 177 CDD SANT 3 46 IPR001005 -
Trme32227g00001 177 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Trme32227g00001 177 Pfam Myb-like DNA-binding domain 1 43 IPR001005 -
Trme32227g00001 177 SUPERFAMILY Homeodomain-like 2 54 IPR009057 -
Trme32227g00001 177 Coils Coil 76 96 - -
Trme32227g00001 177 SMART sant 1 48 IPR001005 -
Trme32227g00001 177 Gene3D - 3 92 - -
Trme32227g00001 177 ProSiteProfiles SANT domain profile. 1 50 IPR017884 -
Trme32227g00001 177 MobiDBLite consensus disorder prediction 35 57 - -
Trme32227g00001 177 PANTHER MYB PROTEIN-RELATED 1 80 - -
Trme32227g00001 177 ProSiteProfiles Myb-like domain profile. 1 46 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32227g00001 Trme-Chr32227 76 609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32227g00001 1 73 MYB Transcription Factor Family AT4G18770 68.493 1.17e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trme32227g00001 Myb_DNA-binding 5.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32227g00001 K09422 - psat:127129356 198.364