Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32125g00001 ATGCAACTAGAGGAAGAGGAATTTGATTTATCATATCTCCTTGAGGATGTAGTTGATTTGTACTATCCAATTGCAATGAAGAAAGGTGTAGAACTTGTATTGGATCCTTGTAATGGTTCTGTTATCAAATACTCACATGTGAAAGGTGATAGAAGAAAATTGAAGCAAGTTTTGTGTAACTTGTTAAGCAATGCTGTTAAATTTACTGATGAAGGACACATAACAGTTAGAGCATGGACTCAGAAAGCAACATTGCAAAACTCAATAATCAAGACTAACCAAAGTAGTGTTGTGAAATCTTTGTCTTGGTTGTTTGATAAGAAAAACAAAGAATGTGAGGATATAGAAGCTGTGAATTCAGTTCAACATGATTCATGTTTTATGGATTTTGTATTTGAAGTTGATGATACAGGGAAAGGAATTCCTAAAGAGAATCATAAGTCAGTGTTTGAGAATTATGTTCAAGTTAAGGAGAATTCTGTTGGCCAAGTTGGAACTGGCTTAGGACTTGGGATTGTGCAGTCATTG 528 0.3447 MQLEEEEFDLSYLLEDVVDLYYPIAMKKGVELVLDPCNGSVIKYSHVKGDRRKLKQVLCNLLSNAVKFTDEGHITVRAWTQKATLQNSIIKTNQSSVVKSLSWLFDKKNKECEDIEAVNSVQHDSCFMDFVFEVDDTGKGIPKENHKSVFENYVQVKENSVGQVGTGLGLGIVQSL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32125g00001 176 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2 175 IPR036890 -
Trme32125g00001 176 Gene3D - 1 176 IPR036890 -
Trme32125g00001 176 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 49 175 IPR003594 -
Trme32125g00001 176 ProSiteProfiles Histidine kinase domain profile. 1 176 IPR005467 -
Trme32125g00001 176 SMART HKATPase_4 49 176 IPR003594 -
Trme32125g00001 176 PRINTS Bacterial sensor protein C-terminal signature 164 176 IPR004358 GO:0016310|GO:0016772
Trme32125g00001 176 PRINTS Bacterial sensor protein C-terminal signature 148 158 IPR004358 GO:0016310|GO:0016772
Trme32125g00001 176 PRINTS Bacterial sensor protein C-terminal signature 130 144 IPR004358 GO:0016310|GO:0016772
Trme32125g00001 176 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32125g00001 Trme-Chr32125 90 617 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32125g00001 1 176 Histidine Kinase Gene Family AT2G47430 57.542 2.96e-61 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32125g00001 - - mtr:11417449 311.227