Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32072g00001 CTTCAGTTTGAGAATAATTGTGATATTGGAGTGTTCTCTAAACTTACCAATGCCTATTGTATGGTTGCCATTGGAGGTTCTGAAAGCTTCTACAGTGTATTTGAATCCGAGTTATCTGGTGTTATCCCTGTGGTGAAGACATCTATTGCTGGCACTCGTATTGTTGGCCGTCTTTGTGCTGGAAACAAGAACGGGCTTCTCTTGCCCCATACCACCACAGACCAAGAACTTCAACATTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGAGGATAGAAGAAAAATTATCTGCTTTGGGAAATTGTATTGCATGTAATGACCACGTGGCCCTCACTCACACTGATCTTGACAGGGTACTATTTCATCGAAGATTAAAGACTGTTTTCCTCTATTAA 399 0.4085 LQFENNCDIGVFSKLTNAYCMVAIGGSESFYSVFESELSGVIPVVKTSIAGTRIVGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEEKLSALGNCIACNDHVALTHTDLDRVLFHRRLKTVFLY 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32072g00001 132 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 119 IPR002769 GO:0042256|GO:0043022
Trme32072g00001 132 SUPERFAMILY Pentein 2 120 - -
Trme32072g00001 132 Hamap Translation initiation factor 6 [eif6]. 1 132 IPR002769 GO:0042256|GO:0043022
Trme32072g00001 132 Gene3D - 1 122 - -
Trme32072g00001 132 SMART eIF6neu2 1 132 IPR002769 GO:0042256|GO:0043022
Trme32072g00001 132 Pfam eIF-6 family 1 119 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32072g00001 Trme-Chr32072 83 964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32072g00001 1 119 Eukaryotic Initiation Factors Gene Family AT3G55620 86.555 3.81e-77 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32072g00001 K03264 - gmx:100800352 232.261