Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32071g00001 ATGGTGTTCATGAAAAAGGGTTTGGTTGATAGCAACTATGATGATGTTGCTGATATTCTGACTGGTAAAGAAAATTGGTGTATCAAAGTAAGGGTTCTTCGTTTGTGGAAGGTTCCTGCCTTTCTGAATCCATGTGAATCTAACTCTATTGAGATGGTGTTGGTTGATGAGAAGGTAATTGTTTCTGTTCTTAAGGGGGGAAAAATTCATGCTACTATTAGGAAGCAGCTTATTTATATGTTTGAATCCAAGCTTGATGAGGGACAAGTATATGAGATGTCATATTTTTCTGTTTTGCCCCAAAGTGGGTCATATCGTACGACCCTTCATCCATACAAACTTATATTCCAATTGAAGACAAACGTTACACTTTCTGAAAGTTCTGATATAACTCAATATGGTATAAGTCCTACAAAGATTGCTGAAATTTGTGCTCATACTCATGACTATGAGTTCTTGGTTGATGTAATTGGTTTGATTACTRGTATTTCTGCTGAAAGGGAGTATGTTCGGGATGGGAAGTTAACTAAAATGGTTATTGTTGAGTTAACTGATGATAGTGGTAAATGTGAATGTGCCTTATTTGGAGATTATGTTGATGAGTTGAATAAGAAAATCGGAAAATCTGCTGGTGGTTTGCCAATCCTTGTTGTGCAGTTTGCTAAAGTTAAAATTTTCAGAG 682 0.3592 MVFMKKGLVDSNYDDVADILTGKENWCIKVRVLRLWKVPAFLNPCESNSIEMVLVDEKVIVSVLKGGKIHATIRKQLIYMFESKLDEGQVYEMSYFSVLPQSGSYRTTLHPYKLIFQLKTNVTLSESSDITQYGISPTKIAEICAHTHDYEFLVDVIGLITXISAEREYVRDGKLTKMVIVELTDDSGKCECALFGDYVDELNKKIGKSAGGLPILVVQFAKVKIFR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32071g00001 227 Gene3D - 128 227 IPR012340 -
Trme32071g00001 227 CDD RPA1_DBD_A_like 27 122 - -
Trme32071g00001 227 Pfam Domain of unknown function DUF223 52 128 IPR003871 -
Trme32071g00001 227 SUPERFAMILY Nucleic acid-binding proteins 136 226 IPR012340 -
Trme32071g00001 227 SUPERFAMILY Nucleic acid-binding proteins 12 127 IPR012340 -
Trme32071g00001 227 Gene3D - 12 124 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32071g00001 Trme-Chr32071 88 1052 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32071g00001 66 226 Core DNA Replication Machinery Family AT2G06510 24.551 5.58e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32071g00001 - - tpra:123885964 315.464