Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32041g00001 ACAGGTGGAGAAATAGTTCAAGTTCAAGGAGGTCACATTGTTAGAGCAACAGGTAGAAAAGATAGGCATAGTAAGGTATATACTGCGAAAGGTCCTCGCGATCGACGTGTTCGTTTATCAGCACATACAGCAATTCAATTCTACGATGTTCAAGATCGGCTCGGCTATGATAGACCGAGTAAAGCTGTTGATTGGCTTATCAAAAAGGCGAAATCGGCTATTGATAAGCTTGATCAACTTCCTCCATGGAATCCAATTCCTAATGCAACAGAAGAGGAAGGGACTAATAATAATGTAGTAGAAACAAATGAAATGGTTATTGCAGCAGAAAATTCAGAATCTTCTGGTTACAATATGCAGCAGAATAATCACAATCACCATAACCATTCAGCTTTTATTCAATCAACTATTGATAATGATGCTATAGCATTTTTTCCAACAAGTTCTGTTGCTGAAACTATGAATTTTCAAAGCTATTCTTCTGATATAATCTCAAGAACAAACAACTCAACACAGGATCTTGGTCTTTCTCTTCATTCATTTCAAGACAATTCAGCTACAAATGATCAAACACTTTTCTCTGAATCAAACCCTGTTGGATTTGATGCTAATTATCATAGGATTGTGAATTGGAACAATGATCATGGAACAACTGATATGAATAGAACTGGTTTCATGGTTAATTCGCCTGCGTTTTTAGGCCAAGGTTCGGCTTTTTCCGCCCATAGGGGGACCCTTCAGTCCAGTTTTTCGCCTTCGCTTCGTCCTTNNNNNNNNTNNNNNNNNNNGGATTCTTCGGTGGATCATCATAATCATAAGTCTCATTCTCATCAACCAATTAACCAAGCTTCTATCTTTGGTAGCAGGTTTTTGTCTGATGCTTTGACAGGTTTCTGTATTCCTGCTAGAATTCAAGGCGACGATGAGAGCCATGGAGTCGGTTCCGAAAGGCCATCCTCTTCTTCTAATTCTCATCACTAA 981 0.3823 TGGEIVQVQGGHIVRATGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLDQLPPWNPIPNATEEEGTNNNVVETNEMVIAAENSESSGYNMQQNNHNHHNHSAFIQSTIDNDAIAFFPTSSVAETMNFQSYSSDIISRTNNSTQDLGLSLHSFQDNSATNDQTLFSESNPVGFDANYHRIVNWNNDHGTTDMNRTGFMVNSPAFLGQGSAFSAHRGTLQSSFSPSLRPXXXXXXXDSSVDHHNHKSHSHQPINQASIFGSRFLSDALTGFCIPARIQGDDESHGVGSERPSSSSNSHH 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32041g00001 326 Pfam TCP family transcription factor 18 129 IPR017887 -
Trme32041g00001 326 ProSiteProfiles TCP domain profile. 19 77 IPR017887 -
Trme32041g00001 326 MobiDBLite consensus disorder prediction 244 281 - -
Trme32041g00001 326 MobiDBLite consensus disorder prediction 305 326 - -
Trme32041g00001 326 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 273 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32041g00001 Trme-Chr32041 167 1147 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32041g00001 3 323 TCP Transcription Factor Family AT3G15030 40.554 3.29e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trme32041g00001 TCP 2.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32041g00001 - - gmx:100796390 381.719