Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme320416g00001 GACAATTACCTCAACTACCACAAGAGGTTGATTGATCTTGTTAAAGTGGGAGGTGTGATCGGCTACGACAACACCTTATGGAATGGATCTGTGGTAGCACCCCCTGATGCTCCTCTAAGGAAGTATGTTAGGTATTATAGGGATTTTGTTTTGGAGCTTAACAAGGCTTTGGCTGTGGACCCTAGGATTGAAATCTGTATGCTTCCTGTTGGTGATGGAATCACTATCTGCCGTCGGATCAAGTAA 246 0.4431 DNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITICRRIK 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme320416g00001 81 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 80 IPR002935 GO:0008171
Trme320416g00001 81 Gene3D Vaccinia Virus protein VP39 1 81 IPR029063 -
Trme320416g00001 81 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 79 IPR029063 -
Trme320416g00001 81 Pfam O-methyltransferase 1 80 IPR002935 GO:0008171
Trme320416g00001 81 PANTHER O-METHYLTRANSFERASE-RELATED 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme320416g00001 Trme-Chr320416 77 322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme320416g00001 1 80 Monolignol Biosynthesis Gene Families AT4G34050 95.000 1.79e-53 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme320416g00001 K00588 - qsa:O6P43_031044 170.629