Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme32004g00001 ATGTGTGTCTGTGGTGATACAAGTGTTCCTGTAGAAATTGTTCAGGAGGGGGTCTACCGATGTTGGGTACCACCGCATTCTCCGGGATTCGTGAATCTCTACTTGAGCTTTGATGGTCATAATCCTATCAGCCAAGTTGTTAATTTTGAGTATCGTACTCCTGTTTTGCACGACCCAGTTGCTTCTGTGGAAGAGAAGAACTGGGATGAGTTTCGACTTCAAATGAGGCTTGCTTATTTGCTCTTTGCTAAACAGCAGAGTCTTGATGTCATCTCTAGTAAAGTATCACCTAGTAGACTAAAGGAGGCAAGAGAATTCTCCTTAAAGACATCATTTATTTCTAATACTTGGCAATACTTATCGAAGTCAACTTTAGACAACAAAATTCCATTTNCACAAGCAAAAGATGCACTGTTTGGAATTGCATTGAAAAACAGATTAAAGGAATGGCTTTCAGAAAAAATTGTTTTAGGATCTAAGACTACTGAATATGACGCACAAGGCCAAAGTGTCATCCATTTGTGTGCAATTTTGGAATATACATGGGCTGTTACTTTATTTTCATGGTCAGGCTTGTCGCTAGATTTTCGGGATAAATTTGGATGGACTGCTCTTCATTGGGCAGCATATTACGGCAG 638 0.3966 MCVCGDTSVPVEIVQEGVYRCWVPPHSPGFVNLYLSFDGHNPISQVVNFEYRTPVLHDPVASVEEKNWDEFRLQMRLAYLLFAKQQSLDVISSKVSPSRLKEAREFSLKTSFISNTWQYLSKSTLDNKIPFXQAKDALFGIALKNRLKEWLSEKIVLGSKTTEYDAQGQSVIHLCAILEYTWAVTLFSWSGLSLDFRDKFGWTALHWAAYYG 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme32004g00001 212 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 2 212 - -
Trme32004g00001 212 Gene3D Immunoglobulins 1 55 IPR013783 -
Trme32004g00001 212 SUPERFAMILY Ankyrin repeat 142 212 IPR036770 -
Trme32004g00001 212 Gene3D - 141 212 IPR036770 -
Trme32004g00001 212 SUPERFAMILY E set domains 2 52 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme32004g00001 Trme-Chr32004 16 653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme32004g00001 2 212 CAMTA Transcription Factor Family AT3G16940 59.155 3.78e-85 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme32004g00001 K21596 - gmx:100793970 373.629