Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31871g00001 ATGGTTCAGCTATGGTTGAACCAATTGAATCATGATCCGGAGGGAACTAGTCTTTCTCCAGGTTTGCCATATGAGAAGTTCTACTCTTTGATCAGTTCTGTTGATGCTAAAGCCGCTAATGCAACAATTGAAGATGCTCAAATCTGTGAGGTTGGAACTCTTGATCCTAGCAAAGTAAAGGGAAAAATCTTGTTCTGTCTCCTAAGGGAGATAAATGGATTAGTTTATGCAGAAGAGGAAGCTGTTTCTGGTGGAGCAATAGGACTTATTCTGGGAAATGATAAGCAACGTGGAAATGACATTATGGCATATCCTCATTTGTTGCCAACTTCACATATCAATTACACAGATGCTGAATATGTTTATTCCTACATCAAAGACACCAA 386 0.3912 MVQLWLNQLNHDPEGTSLSPGLPYEKFYSLISSVDAKAANATIEDAQICEVGTLDPSKVKGKILFCLLREINGLVYAEEEAVSGGAIGLILGNDKQRGNDIMAYPHLLPTSHINYTDAEYVYSYIKDT 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31871g00001 128 Pfam PA domain 47 119 IPR003137 -
Trme31871g00001 128 CDD PA_subtilisin_like 15 128 - -
Trme31871g00001 128 Gene3D - 8 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31871g00001 Trme-Chr31871 364 1039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31871g00001 14 128 Subtilisin-like Serine Gene Family AT5G59810 51.304 7.26e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31871g00001 - - pcin:129318364 153.68