Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3186g00001 ATGCAGTTTGATGAAGTTGTGTACAAAATCAAAGACAAAAAAGGAGGAATATTTAAGAAGAAAACAAAAGTAGAAGAGAAAACAATACTAAAAGGAGTAACAGGAATTGTTAAACCAGGTGAAATGTTAGCAATGTTAGCACTTTTAAGATTACCAAATACTGTTACTAAAGACGAAAAAGTTTCGCACGCAAAAAATGTTATTGATCAACTTGGTTTAACAAAGTGTAAAGATAGCATTGTTGGAAGTGCTTATCTAAGAGGTGTTTCTGGTGGAGAAAGGAAAAGAGTTAGTATTGGACAAGAATTGCTTATAAATCCTAGTTTGTTGTTTCTTGATGAACCTACTTCTGGTTTGGATTCTACAACAGCGCAAAGGATTGTTTCGACTTTGTGGGATTTAGCGAGAGAAGGGAATGTTGTTTATTTTGGAAAAGGATCTGAAGCTATTGAATATTTTTCTAATATTGGTTATTCTCCTGCTATGGCTATGAACCCTTCAGATTTCCTTTTGGATCTTGCAAACG 526 0.3384 MQFDEVVYKIKDKKGGIFKKKTKVEEKTILKGVTGIVKPGEMLAMLALLRLPNTVTKDEKVSHAKNVIDQLGLTKCKDSIVGSAYLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWDLAREGNVVYFGKGSEAIEYFSNIGYSPAMAMNPSDFLLDLAN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3186g00001 175 Gene3D - 42 143 IPR027417 -
Trme3186g00001 175 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 134 174 - -
Trme3186g00001 175 Pfam ABC transporter 27 117 IPR003439 GO:0005524
Trme3186g00001 175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 163 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3186g00001 Trme-Chr3186 49 844 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3186g00001 55 131 Calmodulin-binding Proteins AT2G36910 33.766 4.49e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3186g00001 K05681 - gmx:100816135 218.009