Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme31869g00001 ATGGTACAAAAGAAGAGTTTCTATGATTCTACTGATTTCTTCCCTGAACCAAAGCACAATGTTTCGATCTATGGAGAGATTGAAAAAAGGTTGAAGATGCGTGGGATTAATCAACCTTCACAAGATCTCGACACACTCAAGCATATCTTAGAGGCTCTCCAGCTTAAAGGCCTTCTTCATTCCCAAAAACCAAACCAATCTCCCATTGTCCTAATGAAACCTCTTAGATCTTCTTCTCGGTTCGACCAGTATAATGGTCGAACCGGATACGATTCTCCTCCTCCACATTCTTCAGTTCGGTCCAGTCCTCGAGCTCGCCGGAACTTAAGTCCTAGACTTTCNGGTGAGAATGATCGGGCTCAAGTTAGTTCAAGAAACTCGAGCCCGACCAGGAGGAATGTCCCAAACGTGGAGACACGGAGGAGAGTTAGTAACGAAGGTGTTGATTCGAGAAGAGTGTCTCCAGTTCATTCGCCTAAGATAAGTTCAAGAAGAAATGCAACGGCTCCGACAATGACAGGTGGATCTCCTAGAATGAGAAAAGTGATTGATCCTAAGGTGAAAAATTTGAGTGTAGCAGAAGATGAATGGTCCACAGTTTCAGACAATAGCTTCACCACCTCTAATTCACATACAGATACAGAGAGGTATAAACTGGATGAGTACAAGGAAGGGAGGAATCTATTAGATAGATGTGATAAGTTGCTGAACAGTATTGCTGAGATAACAGCAGCGAACGAGTTACAACCGAGTCCAGTATCCGTTCTTGACTCGTCCTTTTACAAAGACGAGTGGTGTTCACCTTCACCAATTACAAAACGATGCATTGATTACAATTTCAAAG 844 0.4289 MVQKKSFYDSTDFFPEPKHNVSIYGEIEKRLKMRGINQPSQDLDTLKHILEALQLKGLLHSQKPNQSPIVLMKPLRSSSRFDQYNGRTGYDSPPPHSSVRSSPRARRNLSPRLSGENDRAQVSSRNSSPTRRNVPNVETRRRVSNEGVDSRRVSPVHSPKISSRRNATAPTMTGGSPRMRKVIDPKVKNLSVAEDEWSTVSDNSFTTSNSHTDTERYKLDEYKEGRNLLDRCDKLLNSIAEITAANELQPSPVSVLDSSFYKDEWCSPSPITKRCIDYNFK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme31869g00001 281 PANTHER LONGIFOLIA PROTEIN 3 278 IPR033334 GO:0051513
Trme31869g00001 281 MobiDBLite consensus disorder prediction 156 173 - -
Trme31869g00001 281 MobiDBLite consensus disorder prediction 80 179 - -
Trme31869g00001 281 MobiDBLite consensus disorder prediction 80 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme31869g00001 Trme-Chr31869 20 993 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme31869g00001 1 278 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 30.249 2.10e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme31869g00001 - - vvo:131644441 481.87