Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3181g00001 GCATCCATTTGCAAGGAATTGAGACCGCTTGAGTCTGAATTTGACGAAGAGGAAAAAATATCTGATGCCATTTCAGAGGAACATGAATATCATTTTGGGAGGCCCAAGTCAAGGGACGAGGCTTTGCACTTTTTGAATGAGATTGGTTGGCTGTTTCAAAGGGAAAGGTTCTCGAATGTGCATGAGGTTCCAGATTATTCGCTTGACAGGTTCAAATTTGTACTAACGTTTTCCGTGGAAAGAAACTGTTGCATGTTAGTCAAAACCCTTCTAGATATACTGGTTAGTAAACACTTCGAAGGAGAAAGGTTGTCAACAGGGTCGATTGAGATGCTCAAAGCAATCCAACTCCTAAATAGAGCAGTGAAAAGAAAGTACATGAGCATGGTTGATTTGCTCATCCACTATTGTATACCTAGCAAAAATGATACATCCAAGAAATATATATTTCCACCAAATCTTGAGGGCCCTGGTGGTATTACTCCCTTGCATTTGGCTGCATCCACATCAGATTCAGAGGGTGTTATTGACTCTTTAACAAATGATCCACAAGAGATTGGGTTGAAGTGCTGGGAGACCCTTGTGGATGAAAGTGGGCAGACTCCACATGCMTATGCYGTGATGAGAAATAATTACTCTTATAATATGTTGGTTGCCCGTAAACGTTCTGATAGACAAAGAAGTGAAGTTGCAGTTAGAATTGACAATGAGATACAGCTCCCATCACTTGAAGTTGAGCTTATGCAAAAGCGAATTAACCAAGCTAAACGAGTTGGGGACTCCTGTTCCAAGTGTGCTATTGCAGAAGTTCGCTCCAAAAGAAAATTTTCCGGTTCACGGAGCTGGCTTCATGGTCCCTTTATTCATTCGATGCTAGCTGTTGCTGCTGTTTGTGTATGTGTTTGTGTGTTATTCCGTGGAACTCCTTTCGTAGGCTCAGTTTCTCCCTTCAGGTGGGAAAACTTGGATTATGGCGCACTTTAA 984 0.4177 ASICKELRPLESEFDEEEKISDAISEEHEYHFGRPKSRDEALHFLNEIGWLFQRERFSNVHEVPDYSLDRFKFVLTFSVERNCCMLVKTLLDILVSKHFEGERLSTGSIEMLKAIQLLNRAVKRKYMSMVDLLIHYCIPSKNDTSKKYIFPPNLEGPGGITPLHLAASTSDSEGVIDSLTNDPQEIGLKCWETLVDESGQTPHAYAVMRNNYSYNMLVARKRSDRQRSEVAVRIDNEIQLPSLEVELMQKRINQAKRVGDSCSKCAIAEVRSKRKFSGSRSWLHGPFIHSMLAVAAVCVCVCVLFRGTPFVGSVSPFRWENLDYGAL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3181g00001 327 SUPERFAMILY Ankyrin repeat 117 214 IPR036770 -
Trme3181g00001 327 Gene3D - 75 244 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3181g00001 Trme-Chr3181 3 1573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3181g00001 1 327 SBP-box Gene Family AT1G20980 49.240 7.78e-89 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3181g00001 - - gmx:100812180 511.146